Package: TotalCopheneticIndex 2.0.1

TotalCopheneticIndex: Quantify the Balance of Phylogenetic Trees

Measures the degree of balance for a given phylogenetic tree by calculating the Total Cophenetic Index. Reference: A. Mir, F. Rossello, L. A. Rotger (2013). A new balance index for phylogenetic trees. Math. Biosci. 241, 125-136 <doi:10.1016/j.mbs.2012.10.005>.

Authors:Martin R. Smith [aut, cre, cph]

TotalCopheneticIndex_2.0.1.tar.gz
TotalCopheneticIndex_2.0.1.zip(r-4.7)TotalCopheneticIndex_2.0.1.zip(r-4.6)TotalCopheneticIndex_2.0.1.zip(r-4.5)
TotalCopheneticIndex_2.0.1.tgz(r-4.6-any)TotalCopheneticIndex_2.0.1.tgz(r-4.5-any)
TotalCopheneticIndex_2.0.1.tar.gz(r-4.7-any)TotalCopheneticIndex_2.0.1.tar.gz(r-4.6-any)
TotalCopheneticIndex_2.0.1.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
TotalCopheneticIndex/json (API)
NEWS

# Install 'TotalCopheneticIndex' in R:
install.packages('TotalCopheneticIndex', repos = c('https://ms609.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/ms609/treetools/issues

On CRAN:

Conda:

1.70 score 3 scripts 176 downloads 4 exports 12 dependencies

Last updated from:68c2204beb. Checks:9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64OK111
source / vignettesOK160
linux-release-x86_64OK111
macos-release-arm64OK115
macos-oldrel-arm64OK74
windows-develOK70
windows-releaseOK82
windows-oldrelOK65
wasm-releaseOK93

Exports:list.ancestorstcitci.contexttci.context.n

Dependencies:apebitbit64digestfastmatchlatticenlmePlotToolsrbibutilsRcppRdpackTreeTools