Package: TotalCopheneticIndex 2.0.1

TotalCopheneticIndex: Quantify the Balance of Phylogenetic Trees

Measures the degree of balance for a given phylogenetic tree by calculating the Total Cophenetic Index. Reference: A. Mir, F. Rossello, L. A. Rotger (2013). A new balance index for phylogenetic trees. Math. Biosci. 241, 125-136 <doi:10.1016/j.mbs.2012.10.005>.

Authors:Martin R. Smith [aut, cre, cph]

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TotalCopheneticIndex.pdf |TotalCopheneticIndex.html✨
TotalCopheneticIndex/json (API)
NEWS

# Install 'TotalCopheneticIndex' in R:
install.packages('TotalCopheneticIndex', repos = c('https://ms609.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/ms609/treetools/issues

On CRAN:

1.70 score 3 scripts 208 downloads 4 exports 23 dependencies

Last updated 3 years agofrom:68c2204beb. Checks:OK: 7. Indexed: yes.

TargetResultDate
Doc / VignettesOKNov 03 2024
R-4.5-winOKNov 03 2024
R-4.5-linuxOKNov 03 2024
R-4.4-winOKNov 03 2024
R-4.4-macOKNov 03 2024
R-4.3-winOKNov 03 2024
R-4.3-macOKNov 03 2024

Exports:list.ancestorstcitci.contexttci.context.n

Dependencies:apebitbit64bitopsclicolorspacedigestfastmatchgluelatticelifecyclenlmePlotToolsR.cacheR.methodsS3R.ooR.utilsrbibutilsRcppRCurlRdpackrlangTreeTools